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Sep 20
Humans sense 10 basic types of smell, scientists say
The thousands of aromas humans can smell can be sorted into 10 basic categories, US scientists say.

Prof Jason Castro, of Bates College, and Prof Chakra Chennubhotla, of the University of Pittsburgh, used a computerised technique to whittle down smells to their most basic essence.

They told the PLoS One journal they had then tested 144 of these and found they could be grouped into 10 categories.

The findings are contentious - some say there are thousands of permutations.

Prof Castro said: "You have these 10 basic categories because they reflect important attributes about the world - danger, food and so on.

"If you know these basic categories, then you can start to think about building smells.

"We have not solved the problem of predicting a smell based on its chemical structure, but that's something we hope to do."

He said it would be important to start testing the theory on more complex aromas, such as perfumes and everyday smells.

In reality, any natural scent was likely to be a complex mix - a blend of the 10 different categories, he said.

Prof Tim Jacob, a UK expert in smell science at Cardiff University, said: "In the 1950s a scientist called John Amoore proposed a theory which involved seven smell categories based upon molecular shape and size.

"He eventually withdrew it, to the poorly suppressed glee of his rival R W Moncrieff, who said there was 'never much solid evidence to support it, and there were difficulties all along the line, but it did stimulate a lot of useful thought'.

"I'm sure that Castro et al's paper will 'stimulate a lot of useful thought'."

Sep 19
Gene discovery could lead to new types of HIV treatments
Scientists have identified a gene which they say may have the ability to prevent HIV, the virus that causes AIDS, from spreading after it enters the body.

In an early-stage study in the journal Nature, researchers said the gene, called MX2, appears to play a key role in how HIV is controlled in human cells, so using it could lead to the development of new, less toxic treatments that harness the body's natural defenses and mobilize them against the virus.

Although there are many more years of research ahead, Mike Malim, who co-led the research at King's College London, described the finding as "extremely exciting" and said it advanced scientists' understanding of how the HIV virus interacts with the immune system.

"Until now we knew very little about the MX2 gene, but now we recognize both its potent anti-viral function and a key point of vulnerability in the life cycle of HIV," he said in a statement about the study, published on Wednesday.

Some 34 million people worldwide are infected with the human immunodeficiency virus (HIV) that causes AIDS - the vast majority of them in poor and developing countries.

But while, particularly in wealthy nations, there are many effective drugs available that allow HIV patients to live long, healthy lives, they often have side-effects and drug resistance can become a problem with long-term use.

In this study, Malim and a team of researchers conducted experiments on human cells in the laboratory, introducing the HIV virus to two different cell lines - one in which the MX2 gene was "switched on", and in the other it which is was "silenced" - and then observing the effects.

They found that in the cells where MX2 was silenced, the AIDS virus replicated and spread, while in the cells where it was switched on, the HIV was unable to replicate and produce new viruses to spread.

Malim said the findings suggest MX2 is a key player in establishing viral control in people with HIV, and that armed with this new knowledge, there are two possible routes for potential drug development using the gene.

"It may be possible to develop either a molecule that mimics the role of MX2 or a drug which activates the gene's natural capabilities," he said.

Sep 19
New way to identify good fat developed
Scientists have devised a completely new way in which they can identify good fat.

Researchers at The University of Texas Health Science Center at Houston (UTHealth) Medical School are studying brown fat with a goal of fighting obesity.

Mikhail Kolonin, Ph.D., the study's senior author and associate professor at the UTHealth Center for Stem Cell and Regenerative Medicine, said that brown adipose tissue, responsible for heat generation, has high importance in the context of metabolic diseases.

He said that brown fat is more common in kids but has recently been discovered in adult humans.

Kolonin asserted that however, measurement of its body distribution has remained technically challenging.

He said that they are reporting a peptide probe that zeroes in on brown fat and can be used for localization of this tissue in mice by whole body imaging.

Kolonin teamed up with UTHealth medical imaging researcher Eva Sevick-Muraca , Ph.D., to develop a near-infrared fluorescence imaging probe that binds to brown adipose vasculature and emits tiny amounts of skin-penetrating light that can be picked up by highly sensitive cameras.

Kolonin's team tested numerous combinations before finding one that selectively localizes to brown fat when administered intravenously. Sevick-Muraca's team coupled the peptide with a dye that could be picked up during whole body scans.

This study has been published in Nature Communications.

Sep 18
Fat near heart can predict kidney patients' deaths
Fat deposits around the heart - which can be spotted through simple CT scans - can help predict the risk of death in patients with chronic kidney disease, research shows.

The study, published in the journal Nephrology Dialysis Transplantation, was conducted by scientists from Canada, Venezuela, Italy and the US, Xinhua reported.

"We wanted to know if this type of heart fat is related to poor outcomes for patients with chronic kidney disease, and it was a very clear marker of risk," said Paolo Raggi, a researcher from the University of Alberta in Edmonton, Canada.

"The greater the amount of fat around the heart, the greater the mortality rates were in patients."

After examining CT scans of 109 American patients with chronic kidney disease from a randomised, clinical trial, the researchers found that for every 10 cubic cm increase in heart fat, the risk of death rose six percent.

The findings also showed that high levels of calcium or plaque in the arteries and high cholesterol levels were strong predictors of large volumes of heart fat.

Previous research showed a link between this heart fat and plaque buildup in the heart arteries, according to the researchers.

Sep 18
Soon, damaged pancreas' could heal themselves
Scientists have successfully grown stem cells, which have the ability to develop into two different types of cells that make up a healthy pancreas.

The research team led by Dr. Hans Clevers of the Hubrecht Institute, The Netherlands, have isolated and grown stem cells from the pancreases of mice using a 3-D culture system previously developed by the scientists.

The results could eventually lead to ways to repair damaged insulin-producing beta cells or pancreatic duct cells.

Cell signalling molecules known as Wnts and a protein called Lgr5 are essential to produce adult stem cells that can be coaxed to grow and divide rapidly.

Clevers said that they have found a way to activate the Wnt pathway to produce an unlimited expansion of pancreatic stem cells isolated from mice.

He said that by changing the growth conditions we can select two different fates for the stem cells and generate large numbers of either hormone-producing beta cells or pancreatic duct cells.

In the study, the pancreases of mice were altered in a way that makes duct cells proliferate and differentiate. Some cells in this new population were stem cells that were capable of self-renewal.

The scientists were able to culture these cells to give rise to large numbers of pancreatic cells or tiny clumps of tissue referred to as organoids.

The results have been published in The EMBO Journal.

Sep 17
What allergy, asthma sufferers need to keep in mind this fall
With summer coming to a close, and kids heading back to school and preparation for fall begins, we shouldn't forget to consider fall allergies.

An estimated 35 million Americans suffer from allergies, which in the fall begin in late August and peak in September.

For those with fall allergies, three triggers typically occur - ragweed, indoor allergens and infections.

"During the summer, people experience the lowest incidence of allergies and asthma so they feel better and stop taking their allergy medications. But they should start taking them again in early September to prevent symptoms before they start," David Rosenstreich, M.D., director of the allergy and immunology division at Montefiore Medical Center, said.

"If allergy sufferers make the mistake of waiting until after their symptoms are in full swing, it's much harder to stop the allergic reaction than to prevent it from even beginning," he said.

One of the biggest culprits for fall allergies is ragweed.

In the fall, ragweed releases pollen into the air and this continues until frost kills the plant closer to winter.

Most prevalent in the Eastern and Midwest states, ragweed causes an allergic reaction commonly called hay fever and results in symptoms that include itchy eyes, nose and throat, sneezing, stuffy or runny nose, tearing or dark circles under the eyes.

An allergy symptom is the result of the immune system overreacting.

Another trigger for allergies during the fall is due to people staying indoors more and they are therefore exposed to allergens like pet dander, dust and mold.

Several precautions to consider includes maintaining an allergen free environment at home, focus on your bedroom: keep your pets out, eliminate the rug because it collects dust and avoid feather pillows.

Make sure the fireplace is well-ventilated and be careful of any leakage and keep basement and bathroom dry to avoid mold growing in these damp areas of the house. Have your heating system cleaned to avoid dust mites when you first turn on the heat.

The third trigger is infections and the flu, which affect the body's immune system and cause it to release antibodies and histamines to fight them off.

The flu vaccine is recommended to help reduce the risk of getting sick, but it's even more important for people who suffer from asthma or other lung conditions.

Sep 17
High-fat diets interrupt stomach's signals to the brain: Study
Indulging in fatty foods could destroy stomach's signals to the brain, according to a new study which gives insight why many dieters tend to regain the weight after losing it.

New University of Adelaide research has found the nerves in the stomach which signal fullness to the brain appeared to be desensitised after long-term consumption of a high-fat diet.

The findings could explain why many dieters tend to regain the weight they have lost.

PhD student Stephen Kentish investigated the impact of high-fat diets on the ability of the gut to signal its fullness, and whether those changes revert back to normal by losing weight.

Study leader Associate Professor Amanda Page said laboratory studies showed the stomach's nerve response does not return to normal upon a return to a normal diet.

"This means you would need to eat more food before you felt the same degree of fullness as a healthy individual," she said.

"A hormone in the body, leptin, known to regulate food intake, can also change the sensitivity of the nerves in the stomach that signal fullness.

"In normal conditions, leptin acts to stop food intake. However, in the stomach in high-fat diet induced obesity, leptin further desensitises the nerves that detect fullness."

Associate Professor Page said the two mechanisms combined meant that obese people needed to eat more to feel full, which fuels their obesity cycle.

She said the results had "very strong implications for obese people, those trying to lose weight, and those who are trying to maintain their weight loss".

"Unfortunately, our results show that the nerves in the stomach remain desensitised to fullness after weight loss has been achieved," she said.

Associate Professor Page says the researchers were not yet sure whether the effect was permanent or just long-lasting.

Sep 16
Does changing breakfast habits really help you cut the flab?
It is a well documented fact that an association exists between breakfast and weight management, however a new study has found that previous researchers designed to find links between these two things often do not prove that one causes the other.

The research led by David Allison, Ph.D., associate dean for science in the University of Alabama School of Public Health, shows that the question of whether eating vs. skipping breakfast affects weight has not been answered by studies.

Andrew Brown, Ph.D., first author of the study, spearheaded the examination of 92 studies about the proposed effect of breakfast on obesity (PEBO). The PEBO-related research literature, the authors found, seemed to be influenced by factors that led to exaggerated beliefs and statements about the purported effects of breakfast consumption on obesity. These include research that lacks probative value and biased research reporting.

Allison and his team found that scientists collectively do not know as much about the relationship between skipping breakfast and obesity as previously thought, based on the current state of PEBO-related research.

Their meta-analysis indicated that there is certainty that breakfast-skipping and obesity are associated, but it cannot confirm whether there is a causal effect of skipping breakfast on obesity.

Brown said that although we know that breakfast-skippers are more likely to be overweight or obese, we do not know if making breakfast-skippers eat breakfast would decrease their weight, nor do we know if making breakfast-eaters stop eating breakfast would cause them to gain weight.

Meanwhile, Allison said that uncertainty should not be confused with evidence of no benefit or harm, though.

"It just means that right now we don't know how changing breakfast-eating habits will influence obesity - eating versus skipping breakfast could help control weight, cause more weight gain or have no effect - and the effect may vary from person to person," the researcher added.

The authors suggest that if causal claims are desired, different research on the topic is needed. They call for stronger study designs that include randomizing people to eat or skip breakfast to help determine causal effects of breakfast on obesity. UAB is leading such a trial in roughly 300 adults at five sites around the world; results from this study are expected in spring 2014.

The study is published in the American Journal of Clinical Nutrition.

Sep 16
Alcohol does not cause depression: Study
Contrary to popular belief, alcohol does not cause depression, Australian scientists have found.

Researchers also debunk the view that mild to moderate alcohol consumption may reduce the risk of depression.

Until now it was believed that alcohol caused people to become depressed, particularly if consumed at excessive levels, according to Professor Osvaldo Almeida, from The University of Western Australia.

"Even one of the diagnoses we have for depressive disorders - Substance Induced Mood Disorder - is a diagnosis where alcohol plays a role," Almeida said.

"However, because of the observational nature of the association between alcohol and depression, and the risk of confounding and bias that comes with observational studies, it is difficult to be entirely certain that the relationship is causal.

"For example, people who drink too much may also smoke, have poor diets and other diseases that could explain the excess number of people with depression among heavy drinkers," he said.

Almeida and fellow researchers with the Health in Men Study (HIMS), including 12,201 men aged 65-83 when recruited in 1996, decided to search for a causal link via physiological pathways instead: specifically the genetic polymorphism, or mutation, most closely associated with alcohol metabolism.

"We now know that certain genetic variations affect the amount of alcohol people consume. There is one particular genetic variation that affects the enzyme responsible for the metabolism of alcohol," Almeida said.

"This variation produces an enzyme that is up to 80 times less competent at breaking down alcohol. Consequently, people who carry this variation are much less tolerant to alcohol. In fact, there is now evidence that alcohol-related disorders are very uncommon in this group.

"Now, if alcohol causes depression, then a genetic variation that reduces alcohol use and alcohol-related disorders, should reduce the risk of depression.

"The great advantage of looking at the gene is that this association is not confounded by any other factors - people are born like that," he said.

The researchers analysed the triangular association between the genetic mutation, alcohol and depression in 3,873 elderly male participants of the study, using data collected over three to eight years.

"We found (as expected) that this particular genetic variant was associated with reduced alcohol use, but it had no association with depression whatsoever," Almeida said.

"The conclusion is that alcohol use neither causes nor prevents depression in older men. Our results also debunk the view that mild to moderate alcohol consumption may reduce the risk of depression," he added.

Sep 14
Gum disease bacteria may worsen arthritis
Scientists have found that a bacteria responsible for gum disease can lead to earlier onset of arthritis and speed up the progression of the crippling condition.

Researchers have found that the bacterium responsible for periodontal disease, Porphyromonas gingivalis, worsens rheumatoid arthritis (RA) by leading to earlier onset, faster progression and greater severity of the disease, including increased bone and cartilage destruction.

Scientists found that P gingivalis produces a unique enzyme, peptidylarginine deiminanse (PAD) which then enhances collagen-induced arthritis (CIA), a form of arthritis similar to RA produced in the lab.

The enzyme changes residues of certain proteins into citrulline, and the body recognises citullinated proteins as intruders, leading to an immune attack.

In RA patients, the subsequent result is chronic inflammation responsible for bone and cartilage destruction within the joints.

University of Louisville School of Dentistry Oral Health and Systemic Diseases group researcher Jan Potempa and an international team of scientists from the European Union's Gums and Joints project studied another oral bacterium, Prevotella intermedia for the same affect, but learned it did not produce PAD, and did not affect CIA.

"Taken together, our results suggest that bacterial PAD may constitute the mechanistic link between P gingivalis periodontal infection and rheumatoid arthritis, but this ground-breaking conclusion will need to be verified with further research," Potempa said.

Studies indicate that compared to the general population, people with periodontal disease have an increased prevalence of RA and, periodontal disease is at least two times more prevalent in RA patients.

Other research has shown that a P gingivalis infection in the mouth will precede RA, and the bacterium is the likely culprit for onset and continuation of the autoimmune inflammatory responses that occur in the disease.

The study was published in the journal PLOS Pathogens.

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